Sinus Headache vs. Migraine: How to Tell the Difference
The symptoms of a migraine attack can overlap with those of a sinus headache, but the causes of and treatment for each are different.

Each type of head pain has distinct causes, however, and can affect different parts of your head. The quickest route to relief is correctly identifying what's causing the pain so you can get effective treatment.
The Difference Between Sinus Headaches and Migraine
“Sinus headache” is technically a misnomer, says Megan Donnelly, DO, the head of the comprehensive headache center and women's neurology at Novant Health in Charlotte, North Carolina. “There's no International Classification of Headache Disorders code for it.”
Indeed, there's no single code for “sinus headache” in the ICHD, a guide that healthcare practitioners use when they record a diagnosis in your medical records. Instead, there are multiple codes for more specific diagnoses, such as “headache attributed to disorder of the nose or paranasal sinuses" and “headache attributed to acute rhinosinusitis,” among others.
Migraine and Sinus Headache Symptoms
Do Sinus Headaches Cause an Aura?
Causes and Risk Factors of Migraine and Sinus Headache
- Deviated septum
- Nasal polyps
- Allergies
- Asthma
Can Allergies and Infected Sinuses Trigger Migraine?
Ongoing sinus inflammation or congestion could trigger migraine for people with chronic sinusitis, says Dr. Trenkle. He adds that allergies or mild sinus inflammation that cause congestion could also be triggers.
Can You Have Migraine and Sinus Headache at the Same Time?
It's possible to experience both sinus-related headaches and migraine, especially if you have chronic sinus disease and a history of migraine attacks, says Trenkle.
No specific diagnosis covers this combination, but doctors can address both when necessary. Trenkle says his practice often helps people dealing with both conditions come up with personalized treatment plans to manage sinus inflammation while addressing migraine.
Sinus Headache and Migraine Misdiagnosis
Trenkle says he often sees patients who received a sinus headache diagnosis even though migraine was the root issue. Donnelly says that she gets a significant amount of referrals for migraine treatment from ear, nose, and throat specialists.
Doctors can use nasal endoscopy, a CT scan, or allergy testing to screen for sinus issues, says Trenkle. Migraine is a clinical diagnosis, so imaging isn't involved, says Donnelly. Your doctor might ask about symptoms specific to migraine to diagnose it instead.
Before a screening appointment, experts say it's a good idea to be ready to report on any recent infections, vision or language changes that occur before headaches, and allergies or other medical diagnoses you might have.
What Other Headache Types Do People Confuse for Sinus Headaches?
Treatment for Sinus Headache vs. Migraine Treatment
Each condition has a different treatment approach, so it's important to get the correct diagnosis first.
Migraine
Medication can be a significant part of migraine treatment.
- Resting in a dark, quiet room
- Hot and cold compresses
- Caffeine in small doses
- Peppermint tea or aromatherapy
Sinus Headache
Trenkle says sinus headache treatment depends on the root cause, so approaches vary from over-the-counter medicines to interventions like surgery (seeking a second opinion from a headache specialist is advised if surgery is recommended). If a sinus infection is the root cause, for example, antibiotics might help you get rid of the headache by fighting the infection.
“Chronic sinusitis may require consistent use of nasal steroids, allergy treatments such as antihistamines or immunotherapy, and sinus surgery for cases that don't improve with other treatments,” Trenkle adds.
You can also try these home remedies to relieve a sinus headache:
- Drink plenty of hot fluids
- Use a nasal rinse or neti pot
- Use a humidifier
The Takeaway
- Migraine can cause sinus symptoms like facial pain, runny nose, and watery eyes, and is more common than sinus headaches.
- Light and sound sensitivity only accompany migraine attacks, while yellow or green snot and fever are unique to sinusitis.
- If you're not sure what's causing your head pain, reach out to a headache specialist physician who can help with screening, diagnosis, and treatment plans.
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Mark Youssef, MD, MA, MFA
Medical Reviewer
Dr. Mark Youssef is currently a headache specialist with vast experience treating chronic migraine, along with other headache disorders such as cluster headache, post traumatic headache, and medication overuse headache. He is also a writer and publishes in medical and literary journals. He has been personally battling against chronic migraine for more than half of his life.

Courtney Telloian
Author
Courtney Telloian is a freelance writer who covers health, psychology, and lifestyle topics. She previously worked as an editor for the mental health brands Psych Central and GoodTherapy. You can find her published work on Healthline, Insider, Psych Central, and GoodTherapy.
In college she minored in Latin, which deepened her passion for language and has made reading dense research papers that much more enjoyable.
Her dedication to accuracy and fine distinctions has come in handy over the years as both a writer and editor, and this is helpful since it makes her annoying in most other settings.